MyProfit
Guide · updated October 9, 2026

Amazon sales in QuickBooks Online, one payout at a time

Amazon doesn't pay you order by order. Every two weeks or so it sends one deposit, after its fees, refunds and reserves. The cleanest way to record that in QuickBooks® Online is one journal entry per payout, split into income and fee accounts, that adds up to exactly the money that reached your bank.

Why one entry per payout

How the entry works: the Amazon Clearing account

Each journal entry credits your income accounts with what Amazon collected for you, debits your expense accounts with Amazon's fees, and debits the payout itself to an Amazon Clearing account (an Other Current Asset). When the deposit shows up in your bank feed, record it as a transfer from Amazon Clearing to your bank account: Amazon Clearing goes back to zero and your bank balance matches. You can also post the payout straight to your bank account instead.

A worked example

A made-up two-week payout of $5,821.30, dated the day Amazon paid it and numbered AMZ- plus the settlement ID, with MyProfit's recommended accounts:

Settlement categoryQuickBooks accountAccount type DebitCredit
SalesAmazon SalesIncome 10,235.20
ReimbursementsAmazon ReimbursementsOther Income 100.03
CommissionsAmazon Seller Fees and ChargesExpense 1,550.31
FBA Shipment FeesAmazon FBA FeesExpense 2,399.27
FBA Storage FeeAmazon Storage FeesExpense 86.40
Promotion FeesAmazon Promotion FeesExpense 45.00
AdvertisingAmazon AdvertisingExpense 310.55
Reserve BalanceAmazon Reserved Balances Suspense AccountOther Current Asset 122.40
Deposit (the payout)Amazon ClearingOther Current Asset 5,821.30
Total 10,335.2310,335.23

Debits and credits are both $10,335.23, and Amazon Clearing gets exactly the $5,821.30 that reached the bank. Sales and reimbursements are income; referral fees, FBA fees, storage, promotions and ads are expenses; the $122.40 Amazon held back is still your money, so it sits in an asset account until Amazon releases it.

Which settlement lines go where

Amazon's settlement report has dozens of line names. MyProfit sorts each into one of these categories, and each category posts to one account, MyProfit's recommendation or one of yours:

CategoryWhat's in itRecommended account
SalesItem price of the units sold, gift wrap, and refunds to buyers Amazon Sales
Product Shipping CollectedShipping charged to buyers Amazon Sales
ReimbursementsAmazon's payments for lost or damaged inventory, and fee refunds Amazon Reimbursements
CommissionsReferral fees and closing fees Amazon Seller Fees and Charges
FBA Shipment FeesFBA pick, pack and weight-handling fees per unit Amazon FBA Fees
FBA Return FeeFees for processing customer returns Amazon FBA Fees
FBA Inbound FeesInbound placement, transportation, prep and AWD fees Amazon FBA Fees
FBA Storage FeeMonthly, long-term and AWD storage fees Amazon Storage Fees
FBA Disposal FeeDisposing of inventory Amazon FBA Fees
Inventory Removal FeesRemoval orders sent back to you, and liquidations Amazon FBA Fees
Promotion FeesCoupon, deal, Lightning Deal and Vine fees Amazon Promotion Fees
AdvertisingSponsored ads charged against your settlements Amazon Advertising
Amazon Shipping Label ExpenseShipping labels bought through Amazon Amazon Shipping
Subscription and Service FeesProfessional seller subscription and service fees Amazon Seller Fees and Charges
OtherAdjustments and anything that doesn't fit above Amazon Seller Fees and Charges
Sales Tax CollectedSales tax Amazon collects and pays for you; usually nets to zero Amazon Sales Tax Collected
Reserve BalanceMoney Amazon holds back from one settlement and releases in the next, and payouts your bank returned Amazon Reserved Balances Suspense Account
Amazon LoansAmazon Lending repayments Amazon Loans

The lines that trip people up

Doing it by hand

  1. In Seller Central, go to Payments, then All statements, and download the Flat File V2 for the payout (how to read it).
  2. Total the amount column by line type with a pivot table on amount-type and amount-description, and group the totals into the categories above. They should add up to the total-amount in the first row.
  3. In QuickBooks Online, choose + New, then Journal entry. Date it the deposit day, add one line per category, put the payout on Amazon Clearing, and check that debits equal credits.
  4. When the deposit reaches your bank feed, match it to Amazon Clearing.

It works, but it's an afternoon every couple of weeks, and Amazon adds new line names now and then.

Or let MyProfit send it

MyProfit loads every Amazon settlement report for you and sends each payout to QuickBooks Online as exactly the entry above:

MyProfit only creates its accounts and the journal entries; it never changes or deletes anything else in your books, and you can disconnect at any time. The same payouts also get a profit figure in MyProfit, after the landed cost of the units sold. See it in the sample store, or read how the connection works. It's part of the Seller plan, $19.99 a month (US dollars), with a 30-day free trial.

On QuickBooks Desktop?

The Settlements page in MyProfit downloads each payout as files for QuickBooks Desktop's batch entry, adding up to the deposit the same way (settlements help).

Questions

The payout above is an example; real payouts carry more categories. Intuit and QuickBooks are registered trademarks of Intuit Inc. Used with permission.

Send your Amazon payouts to QuickBooks Online

MyProfit pulls your orders, fees, settlements, returns and ad spend from Amazon every night and shows your real profit by product, day and payout. 30 days of everything free, then $19.99 a month, or keep the free plan: it finds the money Amazon still owes you and checks your FBA fees, for good.